ngstools

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BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.

myVCF: a web-based platform for target and exome mutations data management

gui bioinformatics ngs ngstools myvcf-gui

Tools for analyzing NGS sequence data and aligned protein sequences

plotly pandas dna protein ngstools ngs-analysis aligned-sequences

This project includes simulated and 'golden standard' datasets, software and scripts that we used to benchmark error correction tools

umi ngstools

pyAmpli: an amplicon-based variant filter pipeline for targeted enriched resequencing data

bioinformatics genomics mips somatic-variants ngs variants amplicons germline ngstools variant-filtration targeted-sequencing haloplex

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