manuscript

A collaboratively written review paper on deep learning, genomics, and precision medicine

📜 🎉 Automated reporting of objects in R

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

An R-tool for comprehensive science mapping analysis. A package for quantitative research in scientometrics and bibliometrics.

Clone me to create your Manubot manuscript

Minimalist LaTeX template for academic papers

Agent Skills for medical research — literature search, reporting-guideline & citation checks, statistics, publication figures, submission. Works with Claude Code, Codex, Cursor & GitHub Copilot. Built by a physician-researcher, tested on real publications. MIT.

Ten Quick Tips for Deep Learning in Biology

Open-source writing skills for Claude Code, Codex, OpenCode, Antigravity, Gemini, OpenClaw, and Hermes. Your creativity. Your agent. Your book.

📚 Virtual Intelligent Publishing Assistant (Vipa): A journal management and publishing software

A collaborative review of the emerging COVID-19 literature. Join the chat here:

Extracting and quantifying graphical representations of river and delta channel networks from binary masks

A checklist to help you avoid all those minor errors when submitting a scientific manuscript

AutoLayoutKit in pure Swift.

AI长篇小说工程化写作流水线 — SQLite记忆、21道Guard门禁、Agent陪审团、防幻觉检查、多小说独立数据库、人工味质量层

The definitive MCP server for Scrivener — connect your novels, screenplays, and manuscripts to Claude, ChatGPT, and any AI assistant. 53 tools: document management, writing analysis, content enhancement, offline semantic search, and character/plot tracking.

Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · 2016

Claude Code skill for academic manuscript writing: IMRAD workflows, literature matrices, tables/figures, and tested utilities.

A repository to practice contributing to a Manubot manuscript

从选题到可复现发布：十个可独立安装的科研 agent skill —— 顶会/期刊论文、科研绘图、基金 proposal 撰写、方法迭代到 SOTA、冷审与代码数据发布。Ten installable agent skills for research: scientific figures, conference and journal manuscripts, research funding proposals, method development, cold review and artifact release.