DFOIL: Introgression Testing for Five Taxa
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May 15, 2021 - Python
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introgression
Here are 10 public repositories matching this topic...
Detecting Archaic Introgression from Population Genetic Data with S*
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Aug 9, 2026 - Python
An expert-guided workflow integrating D-statistic screening and BPP-based Bayesian model testing to reconstruct reticulate evolutionary histories.
phylogenetics bayesian-inference phylogenetic-networks bpp hybridization introgression dsuite evolutionary-genomics multispecies-coalescent
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Sep 11, 2026 - Python
Discordant attachment frequency tool
phylogenetics phylogenetic-networks phylogenomics coalescence introgression introgression-tests multispecies-coalescent
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Oct 21, 2026 - Python
Statistics for Adaptive Introgression
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Jun 18, 2026 - Python
Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile
snps rad population-genomics population-genetics admixture hybridization phylip pyrad admixtools eigenstrat ddrad introgression f-statistics d-statistic rad-sequencing ddrad-sequencing geno ind
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Apr 12, 2018 - Python
Genomic Analysis of Introgressed-Site and -Haplotype Identification
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Jun 23, 2026 - Python
Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files
structure population-genomics population-genetics admixture population-structure pedigree hybridization phylip plink-files introgression popmap structure-file
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Jan 20, 2021 - Python
Snakemake Workflow for Investigating Genomic Landscapes of Introgression
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Jun 24, 2026 - Python
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