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@nebiolabs

New England Biolabs Inc.

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  1. plate-map plate-map Public

    A flexible tool for defining the contents of 96 well plates.

    JavaScript 52 15

  2. EM-seq EM-seq Public

    Tools and Data related to Enzymatic Methylation Sequencing

    Nextflow 36 9

  3. domainator domainator Public

    A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.

    Python 31 2

  4. VarSkip VarSkip Public

    VarSkip multiplex PCR designs for SARS-CoV-2 sequencing

    15 9

  5. ampseer ampseer Public

    Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing library they are read from. It is intended to differentiate betwe…

    Rust 15 1

  6. methylation_tools methylation_tools Public

    A few tools for manipulating methylation call files

    Python 6

Repositories

Showing 10 of 66 repositories
  • domainatoredux Public

    Rust reimagining of Domainator

    nebiolabs/domainatoredux's past year of commit activity
    Rust 0 0 6 0 Updated Nov 4, 2026
  • domainator Public

    A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.

    nebiolabs/domainator's past year of commit activity
    Python 31 2 4 0 Updated Nov 4, 2026
  • EM-seq Public

    Tools and Data related to Enzymatic Methylation Sequencing

    nebiolabs/EM-seq's past year of commit activity
    Nextflow 36 AGPL-3.0 9 6 1 Updated Nov 3, 2026
  • tasmanian-mismatch Public

    Analysis of artifacts in high throughput sequencing data from genomic DNA.

    nebiolabs/tasmanian-mismatch's past year of commit activity
    Rust 0 AGPL-3.0 1 9 2 Updated Oct 30, 2026
  • primer_monitor Public

    a service to allow people to register primers to be monitored for intersecting variants and be notified if new variants arise

    nebiolabs/primer_monitor's past year of commit activity
    Ruby 4 AGPL-3.0 3 1 15 Updated Oct 28, 2026
  • plate-map Public

    A flexible tool for defining the contents of 96 well plates.

    nebiolabs/plate-map's past year of commit activity
    JavaScript 52 AGPL-3.0 15 4 1 Updated Oct 20, 2026
  • relion Public Forked from 3dem/relion

    Image-processing software for cryo-electron microscopy

    nebiolabs/relion's past year of commit activity
    C++ 0 GPL-2.0 242 0 0 Updated Oct 15, 2026
  • VarSkip Public

    VarSkip multiplex PCR designs for SARS-CoV-2 sequencing

    nebiolabs/VarSkip's past year of commit activity
    15 AGPL-3.0 9 0 0 Updated Oct 9, 2026
  • rna-ligation-m6A Public

    Data analysis of RNA ligation products with Illumina and ONT sequencing

    nebiolabs/rna-ligation-m6A's past year of commit activity
    Python 0 AGPL-3.0 0 0 0 Updated Oct 2, 2026
  • bamslice Public

    slices a bam file into chunks of interleaved fastq for efficient downstream processing

    nebiolabs/bamslice's past year of commit activity
    Rust 2 AGPL-3.0 0 0 0 Updated Sep 11, 2026