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Janusson/README.md

I'm an analytical chemist and computational mass spectrometrist. I build measurement systems using methods, instrumentation, and software to produce reliable results.

My work spans analytical method development, mass spectrometry, computational chemistry, and scientific software. I focus on reproducible workflows, traceable results, and distinguishing what the evidence supports from what remains uncertain.

Projects

Mass spectrometry and scientific computing

MSMCP — An open-source Model Context Protocol server that gives AI agents access to mass spectrometry tools. Supports exact-mass calculations, isotope analysis, spectral similarity, quality control, and library searching. Spectral data remains server-side, with provenance attached to derived results.

Website: msmcp.dev

MassFlow — A local-first MS/MS annotation engine for searching experimental spectra against reference libraries. Provides candidate ranking, target-decoy confidence diagnostics, and traceable exports. Designed to distinguish spectral similarity from confirmed chemical identification.

ChromaMCP — Planned chromatographic analysis tools for AI-assisted scientific workflows, informed by USP and ICH standards. Currently at the specification stage.

Quantitative software

PySharpe — A Python toolkit for quantitative portfolio research, optimization, and backtesting, with particular attention to Canadian investors, account structures, and reproducible financial analysis.

Research in progress

Computational ion mobility–mass spectrometry, collision cross-section determination, and molecular substructure analysis. Some work remains private during development.

Elsewhere

Pinned Loading

  1. MassFlow MassFlow Public

    Local-first MS/MS annotation against local spectral libraries: target-decoy FDR, provenance with every result. Python, CLI-first.

    Python 6

  2. PySharpe PySharpe Public

    Portfolio research workspace for Canadian investors: analytics, backtesting, and validation with every assumption stated.

    Python

  3. Janusson Janusson Public

    Profile README.

  4. MSMCP MSMCP Public

    An MCP server exposing mass spectrometry tools to AI clients. Spectra stay out of the context window via server-side references with provenance.

    Python 1