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Hey hackseq 17 organisers, I think we may need a meeting to wrap up this year's hackseq. When can we meet? It'd be 6:30pm at the GSC again if that works.
I think we probably have enough to talk about between ourselves. In a few weeks time (or a month or so), we could meet with the previous hackseq organisers to talk about the future of hackseq.
Hey, from the Doodle, looks like November 8th may be the day. We can keep this ticket as the agenda issue for it. We'll have to do a few things remotely beforehand (as that date is a couple weeks away)
It looks like Team bioSyntax is on track to have a release and publication ready next month.
One thing we discussed is that we would like to publish to a journal such as Genome Biology, Genome Research or Bioinformatics. I know the original plan was F1000 (thus the word limit) and other journals are quite a bit more expensive but would hackseq be willing to help with publishing costs (and/or help secure funding from a partnering group)?
I think this will be mutually beneficial for hackseq going forward and sets the bar high, thus attracting more dedicated students and sponsors (GigaBase Sponsor perk?) in future events.
Hey @ababaian , we explored the other publications options that you had suggested and had a discussion at the meeting last night. The F1000 cost was $150 but we think we could go up to $500 without limiting publication options for other groups. However we would require that your paper be open access. The costs for an Open Access paper are $2975, $5000 and $3000 at Genome Biology, Genome Research and Bioinformatics respectively (USD and excluding additional page & color charges). So they're quite far outside our budget. If you can find an alternative to F1000 within $500 we can definitely do that.
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jasgrewal commentedon Oct 24, 2017
jakelever commentedon Oct 25, 2017
Hey, from the Doodle, looks like November 8th may be the day. We can keep this ticket as the agenda issue for it. We'll have to do a few things remotely beforehand (as that date is a couple weeks away)
jakelever commentedon Oct 31, 2017
ababaian commentedon Nov 8, 2017
Hey Organizers,
It looks like Team bioSyntax is on track to have a release and publication ready next month.
One thing we discussed is that we would like to publish to a journal such as Genome Biology, Genome Research or Bioinformatics. I know the original plan was F1000 (thus the word limit) and other journals are quite a bit more expensive but would hackseq be willing to help with publishing costs (and/or help secure funding from a partnering group)?
I think this will be mutually beneficial for hackseq going forward and sets the bar high, thus attracting more dedicated students and sponsors (GigaBase Sponsor perk?) in future events.
Please consider and let us know,
Artem
jakelever commentedon Nov 8, 2017
@ababaian Awesome. We'll look into it during the meeting tonight
jakelever commentedon Nov 8, 2017
Hey @dfornika @jasgrewal @csiu @lchong @abaghela , just a reminder of the meeting tonight at the GSC
jakelever commentedon Nov 8, 2017
Oh and bring receipts for the AMS Student Initiative Fund form
lchong commentedon Nov 9, 2017
Hey guys I started a new folder on the google drive: Reimbursements/2017
@jakelever I uploaded my scanned receipts there if you want them!
jakelever commentedon Nov 9, 2017
Hey @ababaian , we explored the other publications options that you had suggested and had a discussion at the meeting last night. The F1000 cost was $150 but we think we could go up to $500 without limiting publication options for other groups. However we would require that your paper be open access. The costs for an Open Access paper are $2975, $5000 and $3000 at Genome Biology, Genome Research and Bioinformatics respectively (USD and excluding additional page & color charges). So they're quite far outside our budget. If you can find an alternative to F1000 within $500 we can definitely do that.
ababaian commentedon Nov 9, 2017
Cool. There's a few steps between here and there I have to worry about first.
I'll ask the department for help / out of pocket but the $500 is definitely appreciated.
jakelever commentedon Nov 21, 2017
Finally wrote up the minutes from this meeting. Accessible here