Mangul Lab at USC

Popular repositories Loading

1. benchmarking_SV benchmarking_SV Public

   Updated figures for "A benchmarking of WGS-based structural variant callers" paper

   Jupyter Notebook 27 7

2. benchmarking_error_correction benchmarking_error_correction Public

   This is the GitHub repository for our benchmarking study "Benchmarking of computational error-correction methods for next-generation sequencing".

   Jupyter Notebook 12 7

3. imrep imrep Public

   Forked from mandricigor/imrep

   ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.

   C 11 4

4. pyTCR pyTCR Public

   Jupyter Notebook 11 3

5. RNA-seq RNA-seq Public

   Jupyter Notebook 9 3

6. TAIR TAIR Public

   The Atlas of Immunoglobulin Repertoires (TheAIR)

   Jupyter Notebook 8 1