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Package conflict #3

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Package conflict#3

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@anilakash
anilakash
opened on Oct 11, 2023

Hi,
Thanks for sharing the code for A*NET. While installing packages like torchdrug it is resulting in different types of errors. There is a conflict for the packages. Could you please specify the version for each of these packages.

Thanks

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  1. KiddoZhu commented on Oct 11, 2023

    @KiddoZhu
    KiddoZhu
    on Oct 11, 2023
    Member

    Hi. Thanks for interest in this project. The version specifications can be found in requirements.txt.

  2. anilakash commented on Oct 19, 2023

    @anilakash
    anilakash
    on Oct 19, 2023
    Author

    Hi,
    Thanks for your response. The conflicts were resolved when I used the latest PyTorch. However, it leads to a Torchdrug error for missing header file namely, SparseTensorUtils.h under ATen. In recent PyTorch this file has been moved to ATen/native. I have requested a pull after committing these changes. Please approve if that works.

  3. JuliaGast commented on Oct 26, 2023

    @JuliaGast
    JuliaGast
    on Oct 26, 2023

    Hello @anilakash
    I have the same problem, the torchdrug error for missing header file.

    Could you please let me know your solution?
    Best and Thanks

  4. anilakash commented on Oct 26, 2023

    @anilakash
    anilakash
    on Oct 26, 2023
    Author

    Hi @JuliaGast
    I have forked the official torchdrug implementation and updated the paths to ATen/native. The committed repository is available at https://github.com/anilakash/torchdrug

  5. Cranooooooo commented on Feb 13, 2024

    @Cranooooooo
    Cranooooooo
    on Feb 13, 2024

    Hi @anilakash
    I have problems when setting up the environment.
    I guess it is because of the version mismatch between those packages.

    May I get the version list of your packages?
    Thanks a lot!

  6. anilakash commented on Feb 13, 2024

    @anilakash
    anilakash
    on Feb 13, 2024
    Author

    Hi @anilakash I have problems when setting up the environment. I guess it is because of the version mismatch between those packages.

    May I get the version list of your packages? Thanks a lot!

    Hi @Cranooooooo,

    Thanks for the query. Could you please confirm the specific package. On the other hand, you can try to install other packages as suggested in the original repository and install torchdrug from here https://github.com/anilakash/torchdrug . This works for me. Good luck.

  7. EauDeData commented on Nov 4, 2024

    @EauDeData
    EauDeData
    on Nov 4, 2024

    Hi @anilakash , words don't allow me to thank you enough for your help with your fork.
    For whomever struggling with something similar (in CUDA12.4, Pytorch 2.40) find here a short bash script that worked for me:

    
conda create -n astar python==3.10 -y
conda activate astar; conda clean -a -y; pip cache purge
pip install numpy==1.26.4
pip install torch==2.4.0 torchvision==0.19.0 torchaudio==2.4.0 --index-url https://download.pytorch.org/whl/cu124
pip install torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-2.4.0+cu124.html
pip install torch-cluster -f https://data.pyg.org/whl/torch-2.4.0+cu124.html
pip install pyg-lib -f https://data.pyg.org/whl/torch-2.4.0+cu124.html
echo "Now go and thank this brother git@github.com:anilakash/torchdrug.git"
git clone git@github.com:anilakash/torchdrug.git
cd torchdrug
pip install -r requirements.txt
python setup.py install
cd ..; rm -rf ./torchdrug

pip install ogb
pip install easydict
pip install PyYAML
pip install easydict

  8. anilakash commented on Nov 6, 2024

    @anilakash
    anilakash
    on Nov 6, 2024 via email
    Author

  9. rainbowww24 commented on Nov 12, 2025

    @rainbowww24
    rainbowww24
    on Nov 12, 2025

    Hi @anilakash , words don't allow me to thank you enough for your help with your fork. For whomever struggling with something similar (in CUDA12.4, Pytorch 2.40) find here a short bash script that worked for me:

    
conda create -n astar python==3.10 -y
conda activate astar; conda clean -a -y; pip cache purge
pip install numpy==1.26.4
pip install torch==2.4.0 torchvision==0.19.0 torchaudio==2.4.0 --index-url https://download.pytorch.org/whl/cu124
pip install torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-2.4.0+cu124.html
pip install torch-cluster -f https://data.pyg.org/whl/torch-2.4.0+cu124.html
pip install pyg-lib -f https://data.pyg.org/whl/torch-2.4.0+cu124.html
echo "Now go and thank this brother git@github.com:anilakash/torchdrug.git"
git clone git@github.com:anilakash/torchdrug.git
cd torchdrug
pip install -r requirements.txt
python setup.py install
cd ..; rm -rf ./torchdrug

pip install ogb
pip install easydict
pip install PyYAML
pip install easydict

    Hi @EauDeData , I really can’t thank you enough. I’m a first-year graduate student, and I’ve been running the code repeatedly for two weeks — it kept saying the C++ files weren’t compiled or some ATen-related files were missing. After seeing your method, I’ve decided to give it a try. I truly believe it’ll work. Thank you so much!

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