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build(deps): require iohub>=0.4.0 - #593
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iohub 0.4.0 is on PyPI and includes Biohub/iohub#476 (resume shard sync) and iohub.cli.OptionEatAll, so drop the git source pin in favor of a PyPI floor. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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I'm going to make a new iohub release momentarily with dep updates to fix security issues. |
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Feel free to update this PR directly when the new release is available |
iohub 0.4.1 requires pillow>=13.0.0, which clears waveorder's open Pillow Dependabot alerts, five of them critical. Signed-off-by: Sricharan Reddy Varra <sricharan.varra@biohub.org>
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Nov 2, 2026
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Summary
>=0.3.11to>=0.4.0.[tool.uv.sources]git pin (b7bc648). That commit was pinned for fix(ngff): sync a unit's shards before recording it as done iohub#476 (apply-inv-tf--resumeshard sync) andiohub.cli.OptionEatAll, and both shipped in iohub v0.4.0 (git tag --contains b7bc648→v0.4.0).uv.locknow resolves iohub0.4.0from PyPI.Test plan
uv run pytest tests/cli_tests(90 passed)wo --helpruns andfrom iohub.cli import OptionEatAllworks with iohub 0.4.0🤖 Generated with Claude Code